@article {791,
	title = {Big Data Competence Center ScaDS Dresden/Leipzig: Overview and selected research activities},
	journal = {Datenbank-Spektrum},
	volume = {19},
	year = {2019},
	month = {03/2019},
	pages = {5-16},
	type = {Schwerpunktbeitrag},
	issn = {1610-1995},
	doi = {10.1007/s13222-018-00303-6},
	url = {https://link.springer.com/article/10.1007\%2Fs13222-018-00303-6},
	author = {Erhard Rahm and Wolfgang E. Nagel and Eric Peukert and Ren{\'e} J{\"a}kel and Fabian G{\"a}rtner and Peter F. Stadler and Daniel Wiegreffe and Dirk Zeckzer and Wolfgang Lehner}
}
@article {772,
	title = {RNApuzzler: Efficient Outerplanar Drawing of RNA-Secondary Structures},
	journal = {Bioinformatics},
	volume = {35},
	year = {2019},
	month = {09/2018},
	pages = {1342-1349},
	doi = {10.1093/bioinformatics/bty817},
	url = {https://doi.org/10.1093/bioinformatics/bty817},
	author = {Daniel Wiegreffe and Daniel Alexander and Peter F. Stadler and Dirk Zeckzer}
}
@article {771,
	title = {The Sierra Platinum Service for generating peak-calls for replicated ChIP-seq experiments},
	journal = {BMC Research Notes},
	year = {2018},
	month = {07/2018},
	type = {Research Note},
	abstract = {
Objective

Sierra Platinum is a fast and robust peak-caller for replicated ChIP-seq experiments with visual quality-control and -steering. The required computing resources are optimized but still may exceed the resources available to researchers at biological research institutes.
Results

Sierra Platinum Service provides the full functionality of Sierra Platinum: using a web interface, a new instance of the service can be generated. Then experimental data is uploaded and the computation of the peaks is started. Upon completion, the results can be inspected interactively and then downloaded for further analysis, at which point the service terminates.
},
	keywords = {ChIP-seq, Histone modifications, Peak-caller, Replicate analysis},
	doi = {https://doi.org/10.1186/s13104-018-3633-x},
	url = {https://bmcresnotes.biomedcentral.com/articles/10.1186/s13104-018-3633-x},
	author = {Daniel Wiegreffe and Lydia M{\"u}ller and Jens Steuck and Dirk Zeckzer and Peter F. Stadler}
}
